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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945013.1_cds_XP_016487686.1_78392
CDS Infomation

[gene=LOC107807760] [db_xref=GeneID:107807760] [protein=putative clathrin assembly protein At5g57200] [partial=3'] [protein_id=XP_016487686.1] [location=join(1780..1860,1964..2033,2277..2374,3935..4073,4148..4275,4348..4440,4563..4613,4876..4941,5032..5097,5225..5305,5407..5487,6112..6297,6403..6478,6561..>6586)] [gbkey=CDS]
Sequence

ATGGAGAGCTTTAGAAAAGCATATGGAGCACTTAAAGATTCAACCAAGGTTGGCCTAGCC
AAGGTCAACAGCGAATTTAAGGATTTGGATATCGCTATTGTAAAGGCAACAAACCACGTT
GAAAGCGCTCCAAAAGAAAGGCATGTTGCAATGATATTTGCTGCAACATCGGTTACACGT
CCACGAGCAGACGTTGCCTACTGCATTCATGCACTCTCTAGACGATTGTCAAAGACACGC
AACTGGATAGTTGCCCTAAAGACACTGATAGTTATTCACAGAGTTCTGAGAGAAGGTGAT
CCTACTTTTAAAGAGGAATTGCTGCACTTCTCTCACAGAGGGCATATTTTCCAAATATCC
AACTTTAAAGATGACTCGAGTACACTTGCTTGGGATTGCTCTGCCTGGGTAAGGACTTAT
GGACTTTTTCTGGAGGAAAGACTCGAGTGTTTTAGGACTTTGAAGTATGATATCGAGGCA
GAGAGATTGACCAAAACCTCACCTGGAATTTCCAAGGTGCATAGCAGAACAAGGCACTTA
AATGGTGAAGAACTATTAGAGCAGCTCCCAGCATTGCAGCAGCTTCTATATCGCTTGATT
TGTTGCCAGCCTGAAGGAGGAGCCTGTTACAATTTTCTTATTCAGTATGCCTTAGCACTG
GTTTTGAAGGAGAGCTTCAAGATCTATTGTGCAATCAACGACGGGATTATTAACCTTGTT
GATTTTTTTTTTGAAATGTCCAAGCATGATGCCATAAAAGCTCTCAACATATATAAAAGA
GCGGGGAAACAGGCTGAAAGTCTAGCTCATTTTTATGACTTCTGCAGAGGGCTGGATCTT
GCTCGGACATTTCAGTTTCCCATTTTGAAACAGCCACCTGTTTCCTTTCTGGCAACTATG
GAGGAATACATACGAGAAGCACCACAGATAGGTTCCATGTCAAGTAGGAGGCTGGAGTAT
AGAGAAACGGAGCAAGAACCTGAAACACCTAAAGAACCTGTCCCTGAAGAAAAGGAAGAG
CAAGTTGAAGCAGCTGAAAATGGCAAAGAAGAACAGGTTGAAGCACAAGAGGAACCTCAG
CCTGAAAAATTAGAAGAAACTCCACCGCTGAAATCAACGGAAGAGCCTGTTGATTTGCTG
GGTTTGAACCAATTGGATCGAAAAGTTGCAGAATTAGAGGAAAGCAATGCGTTGGCTCTT
GCGATAATTCAACCGGGTAAAGAAAATCCATCAGCGAATTAT

Peptide Sequence

PEP ID

XP_016487686.1
PEP Infomation

PREDICTED: putative clathrin assembly protein At5g57200, partial [Nicotiana tabacum]
Sequence

MESFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVESAPKERHVAMIFAATSVTR
PRADVAYCIHALSRRLSKTRNWIVALKTLIVIHRVLREGDPTFKEELLHFSHRGHIFQIS
NFKDDSSTLAWDCSAWVRTYGLFLEERLECFRTLKYDIEAERLTKTSPGISKVHSRTRHL
NGEELLEQLPALQQLLYRLICCQPEGGACYNFLIQYALALVLKESFKIYCAINDGIINLV
DFFFEMSKHDAIKALNIYKRAGKQAESLAHFYDFCRGLDLARTFQFPILKQPPVSFLATM
EEYIREAPQIGSMSSRRLEYRETEQEPETPKEPVPEEKEEQVEAAENGKEEQVEAQEEPQ
PEKLEETPPLKSTEEPVDLLGLNQLDRKVAELEESNALALAIIQPGKENPSANY

Transcript Sequence

Gene sequence data has not been registered.